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Found 2739 results for class "Germline". Showing entries 1-20.
| Graph | Cluster | Transcripts | Mean logCPM | Classification | Smed/Human type | Human gene | Annotation |
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Cluster-16419.1 | RNA1509_125 | 8.93 | Int S/G2/M Germline S/G2/M, no gonads |
X1 | HSP90AA1 | RNA1509_125 {Length: 2802} {Type: 5UTR_CDS_3UTR} {Pfam: Hsp90 protein [PF00183.13, score=874.3]} {Human: HSP90AA1, heat shock protein 90kDa alpha (cytosolic), class A member 1 [Source:HGNC Symbol;Acc:5253], e=0.0} {UniRef50_H2YHC6, e=0.0, Uncharacterized protein n=11 Tax=Bilateria RepID=H2YHC6_CIOSA [Invertebrates:]} {Drosophila: Hsp83, Heat shock protein 83 [Source:FlyBase gene name;Acc:FBgn0001233], e=0.0} {Celegans: daf-21, Caenorhabditis elegans Protein DAF-21 (daf-21) mRNA, complete cds. [Source:RefSeq mRNA;Acc:NM_074225], e=0.0} {RNA815_2025.1} {RNA1310_6914.1} {Smed: dd_Smed_v6_56_0_2,dd_Smed_v6_56_0_1} |
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Cluster-9701.2 | RNA1509_15, RNA1509_14264 | 8.7 | Irradiation Int S/G2/M Germline |
RNA1509_15 {Length: 1193} {Type: 5UTR_CDS_3UTR} {RNA815_5866.1} {RNA1310_31679} RNA1509_14264 {Length: 1583} {Type: 5UTR_CDS_3UTR} {RNA815_5866.1} {RNA1310_31679} |
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Cluster-11302.0 | RNA1509_70 | 8.6 | Int S/G2/M Germline |
X2 | P4HB | RNA1509_70 {Length: 3118} {Type: 5UTR_CDS_3UTR} {Pfam: Thioredoxin [PF00085.15, score=218.4]} {Human: P4HB, prolyl 4-hydroxylase, beta polypeptide [Source:HGNC Symbol;Acc:8548], e=0.0} {UniRef50_P09102, e=0.0, Protein disulfide-isomerase n=26 Tax=Euteleostomi RepID=PDIA1_CHICK [Vertebrates:Chordata]} {Drosophila: Pdi, Protein disulfide isomerase [Source:FlyBase gene name;Acc:FBgn0014002], e=1e-173} {RNA815_1453.1} {RNA1310_2450.1} {Smed: dd_Smed_v6_250_0_1} |
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Cluster-7993.3251 | RNA1509_29992 | 8.48 | Int S/G2/M Germline |
RNA1509_29992 {Length: 603} {Type: 5UTR_CDS_3UTR} {RNA815_1206.2} {RNA1310_19080} | ||
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Cluster-16419.5 | RNA1509_806 | 8.07 | Int S/G2/M Germline S/G2/M, no gonads |
HSP90AA1 | RNA1509_806 {Length: 1700} {Type: 5UTR_CDS_3UTR} {Pfam: Hsp90 protein [PF00183.13, score=556.7]} {Human: HSP90AA1, heat shock protein 90kDa alpha (cytosolic), class A member 1 [Source:HGNC Symbol;Acc:5253], e=1e-166} {UniRef50_H2YHC6, e=1e-170, Uncharacterized protein n=11 Tax=Bilateria RepID=H2YHC6_CIOSA [Invertebrates:]} {Drosophila: Hsp83, Heat shock protein 83 [Source:FlyBase gene name;Acc:FBgn0001233], e=1e-157} {RNA815_2025.1} {RNA1310_6914.1} | |
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Cluster-11302.2 | RNA1509_1575 | 7.96 | Int S/G2/M Germline |
X2 | P4HB | RNA1509_1575 {Length: 3179} {Type: 5UTR_CDS_3UTR} {Pfam: Thioredoxin [PF00085.15, score=218.3]} {Human: P4HB, prolyl 4-hydroxylase, beta polypeptide [Source:HGNC Symbol;Acc:8548], e=0.0} {UniRef50_P09102, e=0.0, Protein disulfide-isomerase n=26 Tax=Euteleostomi RepID=PDIA1_CHICK [Vertebrates:Chordata]} {Drosophila: Pdi, Protein disulfide isomerase [Source:FlyBase gene name;Acc:FBgn0014002], e=1e-172} {RNA815_1453.1} {RNA1310_2450.1} {Smed: dd_Smed_v6_250_0_1} |
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Cluster-16419.4 | RNA1509_2660 | 7.63 | Int S/G2/M Germline S/G2/M, no gonads |
HSP90AB1 | RNA1509_2660 {Length: 732} {Type: 5UTR_CDS_3UTR} {Human: HSP90AB1, heat shock protein 90kDa alpha (cytosolic), class B member 1 [Source:HGNC Symbol;Acc:5258], e=5e-06} {Drosophila: Hsp83, Heat shock protein 83 [Source:FlyBase gene name;Acc:FBgn0001233], e=2e-05} {RNA815_2025.1} {RNA1310_6914.1} | |
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Cluster-16419.0 | RNA1509_32 | 7.39 | Int S/G2/M Germline |
X1 | HSP90AA1 | RNA1509_32 {Length: 2767} {Type: 5UTR_CDS_3UTR} {Pfam: Hsp90 protein [PF00183.13, score=874.8]} {Human: HSP90AA1, heat shock protein 90kDa alpha (cytosolic), class A member 1 [Source:HGNC Symbol;Acc:5253], e=0.0} {UniRef50_H2YHC6, e=0.0, Uncharacterized protein n=11 Tax=Bilateria RepID=H2YHC6_CIOSA [Invertebrates:]} {Drosophila: Hsp83, Heat shock protein 83 [Source:FlyBase gene name;Acc:FBgn0001233], e=0.0} {RNA815_2025.1} {RNA1310_6914.1} {Smed: dd_Smed_v6_56_0_1,dd_Smed_v6_56_0_2} |
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Cluster-7993.2648 | RNA1509_2093 | 7.27 | Irradiation Int S/G2/M Germline S/G2/M, no gonads |
X1; X2 | DDX6 | RNA1509_2093 {Length: 3754} {Type: 5UTR_CDS_3UTR} {Pfam: DEAD/DEAH box helicase [PF00270.24, score=139.1]} {Human: DDX6, DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Source:HGNC Symbol;Acc:2747], e=0.0} {UniRef50_P23128, e=0.0, Putative ATP-dependent RNA helicase me31b n=338 Tax=Eukaryota RepID=DDX6_DROME [Invertebrates:]} {Drosophila: me31B, maternal expression at 31B [Source:FlyBase gene name;Acc:FBgn0004419], e=0.0} {RNA815_1155.1} {RNA1310_2612} {Smed: dd_Smed_v6_1034_0_1,dd_Smed_v6_11802_0_1} |
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Cluster-7993.6356 | RNA1509_44 | 7.08 | Irradiation Int S/G2/M Germline |
TUBB2C | RNA1509_44 {Length: 1986} {Type: 5UTR_CDS_3UTR} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.20, score=230.0]} {Human: TUBB2C, tubulin, beta 2C [Source:HGNC Symbol;Acc:20771], e=0.0} {UniRef50_P07437, e=0.0, Tubulin beta chain n=1476 Tax=Eukaryota RepID=TBB5_HUMAN [Invertebrates:]} {Drosophila: betaTub56D, beta-Tubulin at 56D [Source:FlyBase gene name;Acc:FBgn0003887], e=0.0} {RNA815_4702.1} {RNA1310_28419} | |
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Cluster-7993.7151 | RNA1509_114 | 7.07 | Int S/G2/M Germline |
Neoblast; Sexual_biased; X1 | PABPC4 | RNA1509_114 {Length: 3995} {Type: 5UTR_CDS_3UTR} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.17, score=274.8]} {Human: PABPC4, poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:HGNC Symbol;Acc:8557], e=0.0} {UniRef50_A0A088ASD5, e=0.0, Uncharacterized protein n=3 Tax=Ecdysozoa RepID=A0A088ASD5_APIME [Invertebrates:]} {Drosophila: pAbp, , e=0.0} {Celegans: pab-1, Caenorhabditis elegans Protein PAB-1, isoform a (pab-1) mRNA, complete cds. [Source:RefSeq mRNA;Acc:NM_001026538], e=0.0} {RNA815_5271} {RNA1310_2609} {Smed: dd_Smed_v6_11729_0_1} {WURTZEL: Neoblast [dd_Smed_v6_11729_0_1, cytoplasmic poly(A) binding protein (PABPC)]} |
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Cluster-16419.6 | RNA1509_24378 | 7.01 | Int S/G2/M Germline S/G2/M, no gonads |
RNA1509_24378 {Length: 641} {Type: 5UTR_CDS_3UTR} {RNA815_2025.1} {RNA1310_6914.2} | ||
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Cluster-16419.2 | RNA1509_7000 | 6.86 | Int S/G2/M Germline |
HSP90AB1 | RNA1509_7000 {Length: 1089} {Type: 5UTR_CDS_3UTR} {Pfam: Hsp90 protein [PF00183.13, score=147.3]} {Human: HSP90AB1, heat shock protein 90kDa alpha (cytosolic), class B member 1 [Source:HGNC Symbol;Acc:5258], e=1e-105} {UniRef50_A7E3E1, e=1e-114, HSPCA protein (Fragment) n=87 Tax=Eukaryota RepID=A7E3E1_BOVIN [Invertebrates:]} {Drosophila: Hsp83, Heat shock protein 83 [Source:FlyBase gene name;Acc:FBgn0001233], e=1e-105} {RNA815_2025.1} {RNA1310_6914.1} | |
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Cluster-15013.0 | RNA1509_42 | 6.8 | Irradiation Int S/G2/M Germline |
RNA1509_42 {Length: 2610} {Type: 5UTR_CDS_3UTR} {Pfam: Immunoglobulin I-set domain [PF07679.11, score=43.6]} {Drosophila: CG13506, , e=7e-05} {RNA815_3639} {RNA1310_10769} | ||
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Cluster-16419.7 | RNA1509_874 | 6.8 | Int S/G2/M Germline |
X1 | HSP90AA1 | RNA1509_874 {Length: 1863} {Type: 5UTR_CDS_3UTR} {Pfam: Hsp90 protein [PF00183.13, score=823.6]} {Human: HSP90AA1, heat shock protein 90kDa alpha (cytosolic), class A member 1 [Source:HGNC Symbol;Acc:5253], e=0.0} {UniRef50_H2YHC6, e=0.0, Uncharacterized protein n=11 Tax=Bilateria RepID=H2YHC6_CIOSA [Invertebrates:]} {Drosophila: Hsp83, Heat shock protein 83 [Source:FlyBase gene name;Acc:FBgn0001233], e=0.0} {RNA815_2025.1} {RNA1310_6914.1} {Smed: dd_Smed_v6_56_0_1,dd_Smed_v6_56_0_2} |
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Cluster-16419.8 | RNA1509_175 | 6.78 | Int S/G2/M Germline S/G2/M, no gonads |
RNA1509_175 {Length: 574} {Type: 5UTR_CDS_3UTR} {RNA815_2025.1} {RNA1310_6914.2} | ||
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Cluster-16419.3 | RNA1509_12816 | 6.73 | Int S/G2/M Germline |
HSP90AA1 | RNA1509_12816 {Length: 880} {Type: 5UTR_CDS_3UTR} {Pfam: Hsp90 protein [PF00183.13, score=325.4]} {Human: HSP90AA1, heat shock protein 90kDa alpha (cytosolic), class A member 1 [Source:HGNC Symbol;Acc:5253], e=7e-63} {UniRef50_Q8C5U3, e=5e-61, Putative uncharacterized protein (Fragment) n=68 Tax=Eukaryota RepID=Q8C5U3_MOUSE [Invertebrates:]} {Drosophila: Hsp83, Heat shock protein 83 [Source:FlyBase gene name;Acc:FBgn0001233], e=6e-59} {RNA815_2025.1} {RNA1310_6914.1} | |
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Cluster-15013.5 | RNA1509_3600 | 6.6 | Irradiation Int S/G2/M Germline |
C2orf16 | RNA1509_3600 {Length: 1205} {Type: 5UTR_CDS_3UTR} {Pfam: Immunoglobulin I-set domain [PF07679.11, score=36.9]} {Human: C2orf16, chromosome 2 open reading frame 16 [Source:HGNC Symbol;Acc:25275], e=0.001} {UniRef50_V4AXD5, e=7e-04, Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V4AXD5_LOTGI [Invertebrates:Mollusca]} {Drosophila: CG13506, , e=2e-05} {RNA815_3639} {RNA1310_10769} | |
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Cluster-7993.2646 | RNA1509_85, RNA1509_1529 | 6.54 | Irradiation Int S/G2/M Germline |
X1; X2 | DDX6 | RNA1509_85 {Length: 3461} {Type: 5UTR_CDS_3UTR} {Pfam: DEAD/DEAH box helicase [PF00270.24, score=139.3]} {Human: DDX6, DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Source:HGNC Symbol;Acc:2747], e=0.0} {UniRef50_P23128, e=0.0, Putative ATP-dependent RNA helicase me31b n=338 Tax=Eukaryota RepID=DDX6_DROME [Invertebrates:]} {Drosophila: me31B, maternal expression at 31B [Source:FlyBase gene name;Acc:FBgn0004419], e=0.0} {RNA815_1155.1} {RNA1310_2612} {Smed: dd_Smed_v6_1034_0_1,dd_Smed_v6_11802_0_1} RNA1509_1529 {Length: 3433} {Type: 5UTR_CDS_3UTR} {Pfam: DEAD/DEAH box helicase [PF00270.24, score=89.8]} {Human: DDX6, DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Source:HGNC Symbol;Acc:2747], e=1e-153} {UniRef50_P26196, e=1e-167, Probable ATP-dependent RNA helicase DDX6 n=796 Tax=Eukaryota RepID=DDX6_HUMAN [Invertebrates:]} {Drosophila: me31B, maternal expression at 31B [Source:FlyBase gene name;Acc:FBgn0004419], e=1e-153} {RNA815_1155.1} {RNA1310_2612} |
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Cluster-16419.11 | RNA1509_7931 | 6.5 | Int S/G2/M Germline |
HSP90AA1 | RNA1509_7931 {Length: 1108} {Type: 5UTR_CDS_3UTR} {Pfam: Hsp90 protein [PF00183.13, score=471.6]} {Human: HSP90AA1, heat shock protein 90kDa alpha (cytosolic), class A member 1 [Source:HGNC Symbol;Acc:5253], e=1e-133} {Drosophila: Hsp83, Heat shock protein 83 [Source:FlyBase gene name;Acc:FBgn0001233], e=1e-126} {RNA815_2025.1} {RNA1310_6914.1} |
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