Text search

search Exact search

Found 1031 results for log2(IntG2M/JuvG2M) between 0 and -1 and fdr <= 0.05. Showing entries 1-20.

Graph Cluster Transcripts Mean logCPM Classification Smed/Human type Human gene Annotation
1. Cluster-14966.0 RNA1509_89 9.4 Pluripotency maintenance COX6B2 RNA1509_89 {Length: 889} {Type: 5UTR_CDS_3UTR} {Pfam: Cytochrome oxidase c subunit VIb [PF02297.12, score=52.9]} {Human: COX6B2, cytochrome c oxidase subunit VIb polypeptide 2 (testis) [Source:HGNC Symbol;Acc:24380], e=8e-22} {UniRef50_A0A0A9YQ11, e=1e-23, Cytochrome c oxidase subunit 6B2 n=3 Tax=Neoptera RepID=A0A0A9YQ11_LYGHE [Invertebrates:Arthropoda]} {Drosophila: CoVIb, Cytochrome c oxidase subunit VIb [Source:FlyBase gene name;Acc:FBgn0031066], e=2e-25} {RNA815_21423.1} {RNA1310_44632} {Smed: dd_Smed_v6_963_0_1,dd_Smed_v6_26079_0_1}
2. Cluster-12442.3 RNA1509_157, RNA1509_456, RNA1509_1515, RNA1509_1768, RNA1509_16289 9.19 X1 PMP2

RNA1509_157 {Length: 995} {Type: 5UTR_CDS_3UTR} {Pfam: Lipocalin / cytosolic fatty-acid binding protein family [PF00061.18, score=79.9]} {Human: PMP2, peripheral myelin protein 2 [Source:HGNC Symbol;Acc:9117], e=1e-36} {UniRef50_C4N147, e=8e-45, Sodium-calcium exchanger n=2 Tax=Mollusca RepID=C4N147_DORPE [Invertebrates:]} {Drosophila: fabp, fatty acid bindin protein [Source:FlyBase gene name;Acc:FBgn0037913], e=2e-35} {RNA815_7257.1} {RNA1310_38817} {Smed: dd_Smed_v6_599_0_1}

RNA1509_456 {Length: 739} {Type: 5UTR_CDS_3UTR} {Pfam: Lipocalin / cytosolic fatty-acid binding protein family [PF00061.18, score=80.9]} {Human: PMP2, peripheral myelin protein 2 [Source:HGNC Symbol;Acc:9117], e=1e-37} {UniRef50_C4N147, e=8e-45, Sodium-calcium exchanger n=2 Tax=Mollusca RepID=C4N147_DORPE [Invertebrates:]} {Drosophila: fabp, fatty acid bindin protein [Source:FlyBase gene name;Acc:FBgn0037913], e=3e-36} {RNA815_7257.2} {RNA1310_38817} {Smed: dd_Smed_v6_599_0_1}

RNA1509_1515 {Length: 753} {Type: 5UTR_CDS_3UTR} {Pfam: Lipocalin / cytosolic fatty-acid binding protein family [PF00061.18, score=80.8]} {Human: PMP2, peripheral myelin protein 2 [Source:HGNC Symbol;Acc:9117], e=1e-37} {UniRef50_C4N147, e=8e-45, Sodium-calcium exchanger n=2 Tax=Mollusca RepID=C4N147_DORPE [Invertebrates:]} {Drosophila: fabp, fatty acid bindin protein [Source:FlyBase gene name;Acc:FBgn0037913], e=3e-36} {RNA815_7257.2} {RNA1310_38817} {Smed: dd_Smed_v6_599_0_1}

RNA1509_1768 {Length: 686} {Type: 5UTR_CDS_3UTR} {Pfam: Lipocalin / cytosolic fatty-acid binding protein family [PF00061.18, score=81.2]} {Human: PMP2, peripheral myelin protein 2 [Source:HGNC Symbol;Acc:9117], e=7e-38} {UniRef50_C4N147, e=8e-45, Sodium-calcium exchanger n=2 Tax=Mollusca RepID=C4N147_DORPE [Invertebrates:]} {Drosophila: fabp, fatty acid bindin protein [Source:FlyBase gene name;Acc:FBgn0037913], e=2e-36} {RNA815_7257.2} {RNA1310_28923} {Smed: dd_Smed_v6_599_0_1}

RNA1509_16289 {Length: 113} {Type: 5UTR_CDS_3UTR} {RNA815_7257.2} {RNA1310_38817}
3. Cluster-16277.0 RNA1509_36 9.19 X1; X2 EEF1A1 RNA1509_36 {Length: 1603} {Type: 5UTR_CDS_3UTR} {Pfam: Elongation factor Tu GTP binding domain [PF00009.22, score=186.6]} {Human: EEF1A1, eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:3189], e=0.0} {UniRef50_P10126, e=0.0, Elongation factor 1-alpha 1 n=470 Tax=Eukaryota RepID=EF1A1_MOUSE [Invertebrates:]} {Drosophila: Ef1alpha100E, Elongation factor 1alpha100E [Source:FlyBase gene name;Acc:FBgn0000557], e=0.0} {RNA815_169.1} {RNA1310_13899.2} {Smed: dd_Smed_v6_30_0_1,dd_Smed_v6_30_0_2,dd_Smed_v6_6388_0_1}
4. Cluster-10576.0 RNA1509_102 9.14

 Int S/G2/M 

X1 ATP5A1 RNA1509_102 {Length: 2372} {TRANSSPLICED} {Type: 5UTR_CDS_3UTR} {Pfam: ATP synthase alpha/beta family, nucleotide-binding domain [PF00006.20, score=242.3]} {Human: ATP5A1, ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle [Source:HGNC Symbol;Acc:823], e=0.0} {UniRef50_P25705, e=0.0, ATP synthase subunit alpha, mitochondrial n=168 Tax=cellular organisms RepID=ATPA_HUMAN [Unassigned:]} {Drosophila: blw, bellwether [Source:FlyBase gene name;Acc:FBgn0011211], e=0.0} {Celegans: H28O16.1, Caenorhabditis elegans Protein H28O16.1, isoform d. [Source:RefSeq mRNA;Acc:NM_001026358], e=0.0} {RNA815_2316} {RNA1310_10282.1} {Smed: dd_Smed_v6_731_0_1}
5. Cluster-7993.4610 RNA1509_37, RNA1509_59379 9.1 X1 UBC; RPS27A

RNA1509_37 {Length: 750} {Type: 5UTR_CDS_3UTR} {Pfam: Ubiquitin family [PF00240.18, score=210.9]} {Human: UBC, ubiquitin C [Source:HGNC Symbol;Acc:12468], e=2e-91} {Drosophila: Ubi-p5E, Ubiquitin-5E [Source:FlyBase gene name;Acc:FBgn0086558], e=1e-86} {RNA815_10845} {RNA1310_26616} {Smed: dd_Smed_v6_34_0_2,dd_Smed_v6_176_0_2,dd_Smed_v6_1697_0_2}

RNA1509_59379 {Length: 871} {Type: 5UTR_CDS_3UTR} {Pfam: Ubiquitin family [PF00240.18, score=117.4]} {Human: RPS27A, ribosomal protein S27a [Source:HGNC Symbol;Acc:10417], e=2e-42} {Drosophila: RpS27A, Ribosomal protein S27A [Source:FlyBase gene name;Acc:FBgn0003942], e=2e-42} {Celegans: ubq-2, Caenorhabditis elegans Protein UBQ-2 (ubq-2) mRNA, complete cds. [Source:RefSeq mRNA;Acc:NM_067294], e=3e-41} {RNA815_10845} {RNA1310_26616} {Smed: dd_Smed_v6_121_0_1,dd_Smed_v6_516_0_1}
6. Cluster-7993.4606 RNA1509_191 9.09 UBC RNA1509_191 {Length: 1853} {Type: 5UTR_CDS_3UTR} {Pfam: Ubiquitin family [PF00240.18, score=228.0]} {Human: UBC, ubiquitin C [Source:HGNC Symbol;Acc:12468], e=2e-94} {UniRef50_R1DZ00, e=1e-104, Uncharacterized protein n=23 Tax=Eukaryota RepID=R1DZ00_EMIHU [Invertebrates:]} {Drosophila: Ubi-p5E, Ubiquitin-5E [Source:FlyBase gene name;Acc:FBgn0086558], e=2e-89} {RNA815_10845} {RNA1310_26616} {Smed: dd_Smed_v6_34_0_2,dd_Smed_v6_176_0_2,dd_Smed_v6_1697_0_2}
7. Cluster-12442.2 RNA1509_61 9.05 X1 PMP2 RNA1509_61 {Length: 1032} {Type: 5UTR_CDS_3UTR} {Pfam: Lipocalin / cytosolic fatty-acid binding protein family [PF00061.18, score=79.8]} {Human: PMP2, peripheral myelin protein 2 [Source:HGNC Symbol;Acc:9117], e=2e-36} {UniRef50_C4N147, e=8e-45, Sodium-calcium exchanger n=2 Tax=Mollusca RepID=C4N147_DORPE [Invertebrates:]} {Drosophila: fabp, fatty acid bindin protein [Source:FlyBase gene name;Acc:FBgn0037913], e=3e-35} {RNA815_7257.1} {RNA1310_38817} {Smed: dd_Smed_v6_599_0_1}
8. Cluster-7993.3091 RNA1509_100 8.72

 Int S/G2/M 

Neoblast; Sexual_biased; X1 YWHAZ RNA1509_100 {Length: 3231} {Type: 5UTR_CDS_3UTR} {Pfam: 14-3-3 protein [PF00244.15, score=402.5]} {Human: YWHAZ, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:HGNC Symbol;Acc:12855], e=1e-107} {UniRef50_P29310-3, e=1e-123, Isoform C of 14-3-3 protein zeta n=823 Tax=Eukaryota RepID=P29310-3 [Invertebrates:]} {Drosophila: 14-3-3zeta, 14-3-3zeta [Source:FlyBase gene name;Acc:FBgn0004907], e=1e-108} {RNA815_2682.1} {RNA1310_2772} {Smed: dd_Smed_v6_5419_0_1} {WURTZEL: Neoblast [dd_Smed_v6_5419_0_1, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide (YWHAB)]}
9. Cluster-12442.0 RNA1509_18 8.55 Pluripotency repressor FABP3 RNA1509_18 {Length: 682} {Type: 5UTR_CDS_3UTR} {Pfam: Lipocalin / cytosolic fatty-acid binding protein family [PF00061.18, score=30.5]} {Human: FABP3, fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor) [Source:HGNC Symbol;Acc:3557], e=4e-14} {Drosophila: fabp, fatty acid bindin protein [Source:FlyBase gene name;Acc:FBgn0037913], e=2e-14} {RNA815_7257.1} {RNA1310_28923}
10. Cluster-7993.1953 RNA1509_29 8.44 KLK11 RNA1509_29 {Length: 882} {Type: 5UTR_CDS_3UTR} {Pfam: Trypsin [PF00089.21, score=97.0]} {Human: KLK11, kallikrein-related peptidase 11 [Source:HGNC Symbol;Acc:6359], e=4e-12} {Drosophila: CG7542, , e=5e-18} {RNA815_8541.1} {RNA1310_47138.1}
11. Cluster-7993.2501 RNA1509_268, RNA1509_503 8.29 Xins ENO1

RNA1509_268 {Length: 2455} {Type: 5UTR_CDS_3UTR} {Pfam: Enolase, C-terminal TIM barrel domain [PF00113.17, score=525.5]} {Human: ENO1, enolase 1, (alpha) [Source:HGNC Symbol;Acc:3350], e=0.0} {UniRef50_W6U8C0, e=0.0, Enolase n=1 Tax=Echinococcus granulosus RepID=W6U8C0_ECHGR [Invertebrates:Platyhelminthes]} {Drosophila: Eno, Enolase [Source:FlyBase gene name;Acc:FBgn0000579], e=0.0} {RNA815_393.1} {RNA1310_6958} {Smed: dd_Smed_v6_510_0_1}

RNA1509_503 {Length: 2208} {Type: 5UTR_CDS_3UTR} {Pfam: Enolase, C-terminal TIM barrel domain [PF00113.17, score=525.8]} {Human: ENO1, enolase 1, (alpha) [Source:HGNC Symbol;Acc:3350], e=0.0} {UniRef50_W6U8C0, e=0.0, Enolase n=1 Tax=Echinococcus granulosus RepID=W6U8C0_ECHGR [Invertebrates:Platyhelminthes]} {Drosophila: Eno, Enolase [Source:FlyBase gene name;Acc:FBgn0000579], e=0.0} {RNA815_393.1} {RNA1310_6958} {Smed: dd_Smed_v6_510_0_1}
12. Cluster-7993.6039 RNA1509_33 8.28 Pluripotency maintenance SLC25A5 RNA1509_33 {Length: 3502} {Type: 5UTR_CDS_3UTR} {Pfam: Mitochondrial carrier protein [PF00153.22, score=199.8]} {Human: SLC25A5, solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:HGNC Symbol;Acc:10991], e=1e-82} {UniRef50_A0A075A6M7, e=1e-163, Uncharacterized protein n=2 Tax=Opisthorchiidae RepID=A0A075A6M7_9TREM [Invertebrates:Platyhelminthes]} {Drosophila: sesB, stress-sensitive B [Source:FlyBase gene name;Acc:FBgn0003360], e=5e-79} {RNA815_4444} {RNA1310_7537.1} {Smed: dd_Smed_v6_50_0_1,dd_Smed_v6_15010_0_1}
13. Cluster-13493.0 RNA1509_136 8.17

 Int S/G2/M 

Testis; Sexual_biased; Xins ATAD3A RNA1509_136 {Length: 4956} {Type: 5UTR_CDS_3UTR} {Pfam: Domain of unknown function (DUF3523) [PF12037.3, score=242.0]} {Human: ATAD3A, ATPase family, AAA domain containing 3A [Source:HGNC Symbol;Acc:25567], e=0.0} {UniRef50_M4AQD2, e=0.0, Uncharacterized protein n=6 Tax=Bilateria RepID=M4AQD2_XIPMA [Invertebrates:]} {Drosophila: bor, belphegor [Source:FlyBase gene name;Acc:FBgn0040237], e=0.0} {Celegans: atad-3, Caenorhabditis elegans Protein ATAD-3 (atad-3) mRNA, complete cds. [Source:RefSeq mRNA;Acc:NM_063809], e=1e-173} {RNA815_3317} {RNA1310_9302} {Smed: dd_Smed_v6_467_0_1,dd_Smed_v6_20717_0_1}
14. Cluster-7993.2977 RNA1509_178, RNA1509_182, RNA1509_1440 8.03 SULT1C4

RNA1509_178 {Length: 2285} {Type: 5UTR_CDS_3UTR} {Pfam: Sulfotransferase domain [PF00685.22, score=168.9]} {Human: SULT1C4, sulfotransferase family, cytosolic, 1C, member 4 [Source:HGNC Symbol;Acc:11457], e=2e-43} {UniRef50_O00338, e=3e-45, Sulfotransferase 1C2 n=392 Tax=Sarcopterygii RepID=ST1C2_HUMAN [Vertebrates:Chordata]} {Drosophila: St1, Sulfotransferase 1 [Source:FlyBase gene name;Acc:FBgn0034887], e=2e-22} {RNA815_6793} {RNA1310_14124}

RNA1509_182 {Length: 1908} {Type: 5UTR_CDS_3UTR} {Pfam: Sulfotransferase domain [PF00685.22, score=169.4]} {Human: SULT1C4, sulfotransferase family, cytosolic, 1C, member 4 [Source:HGNC Symbol;Acc:11457], e=7e-44} {UniRef50_O00338, e=3e-45, Sulfotransferase 1C2 n=392 Tax=Sarcopterygii RepID=ST1C2_HUMAN [Vertebrates:Chordata]} {Drosophila: St1, Sulfotransferase 1 [Source:FlyBase gene name;Acc:FBgn0034887], e=2e-22} {RNA815_6793} {RNA1310_14124}

RNA1509_1440 {Length: 1144} {Type: 5UTR_CDS_3UTR} {Pfam: Sulfotransferase domain [PF00685.22, score=171.3]} {Human: SULT1C4, sulfotransferase family, cytosolic, 1C, member 4 [Source:HGNC Symbol;Acc:11457], e=7e-46} {UniRef50_O00338, e=3e-45, Sulfotransferase 1C2 n=392 Tax=Sarcopterygii RepID=ST1C2_HUMAN [Vertebrates:Chordata]} {Drosophila: St1, Sulfotransferase 1 [Source:FlyBase gene name;Acc:FBgn0034887], e=3e-23} {Celegans: ssu-1, Caenorhabditis elegans Protein SSU-1 (ssu-1) mRNA, complete cds. [Source:RefSeq mRNA;Acc:NM_075479], e=6e-20} {RNA815_6793} {RNA1310_14124}
15. Cluster-7993.2599 RNA1509_92 8.01 Gut; Asexual_biased; Xins ALDOA RNA1509_92 {Length: 1841} {TRANSSPLICED} {Type: 5UTR_CDS_3UTR} {Pfam: Fructose-bisphosphate aldolase class-I [PF00274.14, score=577.6]} {Human: ALDOA, aldolase A, fructose-bisphosphate [Source:HGNC Symbol;Acc:414], e=1e-178} {UniRef50_G7YM44, e=0.0, Fructose-bisphosphate aldolase (Fragment) n=1 Tax=Clonorchis sinensis RepID=G7YM44_CLOSI [Invertebrates:Platyhelminthes]} {Drosophila: Ald, Aldolase [Source:FlyBase gene name;Acc:FBgn0000064], e=1e-176} {RNA815_21.1} {RNA1310_16645.1} {Smed: dd_Smed_v6_398_0_1,dd_Smed_v6_591_0_1} {WURTZEL: Gut [dd_Smed_v6_398_0_1, aldolase C, fructose-bisphosphate (ALDOC)]}
16. Cluster-7993.2202 RNA1509_77 8 Xins GAPDH RNA1509_77 {Length: 1685} {TRANSSPLICED} {Type: 5UTR_CDS_3UTR} {Pfam: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain [PF02800.15, score=240.2]} {Human: GAPDH, glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:4141], e=1e-167} {UniRef50_P04406, e=1e-175, Glyceraldehyde-3-phosphate dehydrogenase n=732 Tax=Eukaryota RepID=G3P_HUMAN [Invertebrates:]} {Drosophila: Gapdh2, Glyceraldehyde 3 phosphate dehydrogenase 2 [Source:FlyBase gene name;Acc:FBgn0001092], e=1e-162} {RNA815_7608} {RNA1310_18952} {Smed: dd_Smed_v6_78_0_1}
17. Cluster-9418.0 RNA1509_202 8

 Int S/G2/M 

 S/G2/M, no gonads 

 Neoblast 

VDAC2 RNA1509_202 {Length: 1786} {TRANSSPLICED} {Type: 5UTR_CDS_3UTR} {Pfam: Eukaryotic porin [PF01459.17, score=202.0]} {Human: VDAC2, voltage-dependent anion channel 2 [Source:HGNC Symbol;Acc:12672], e=9e-90} {UniRef50_P45880, e=1e-88, Voltage-dependent anion-selective channel protein 2 n=850 Tax=Bilateria RepID=VDAC2_HUMAN [Invertebrates:]} {Drosophila: porin, porin [Source:FlyBase gene name;Acc:FBgn0004363], e=2e-85} {RNA815_4359.1} {RNA1310_17976.1} {Smed: dd_Smed_v6_2119_0_1}
18. Cluster-7993.3393 RNA1509_84, RNA1509_887 7.91 OAZ1

RNA1509_84 {Length: 1598} {Type: 5UTR_CDS_3UTR} {Pfam: Ornithine decarboxylase antizyme [PF02100.12, score=52.8]} {Human: OAZ1, ornithine decarboxylase antizyme 1 [Source:HGNC Symbol;Acc:8095], e=4e-05} {UniRef50_G6DAD8, e=1e-08, Ornithine decarboxylase antizyme n=1 Tax=Danaus plexippus RepID=G6DAD8_DANPL [Invertebrates:Arthropoda]} {Drosophila: Oda, Ornithine decarboxylase antizyme [Source:FlyBase gene name;Acc:FBgn0014184], e=0.008} {RNA815_7315} {RNA1310_16058.1}

RNA1509_887 {Length: 1605} {Type: 5UTR_CDS_3UTR} {Pfam: Ornithine decarboxylase antizyme [PF02100.12, score=52.8]} {Human: OAZ1, ornithine decarboxylase antizyme 1 [Source:HGNC Symbol;Acc:8095], e=4e-05} {UniRef50_G6DAD8, e=1e-08, Ornithine decarboxylase antizyme n=1 Tax=Danaus plexippus RepID=G6DAD8_DANPL [Invertebrates:Arthropoda]} {Drosophila: Oda, Ornithine decarboxylase antizyme [Source:FlyBase gene name;Acc:FBgn0014184], e=0.008} {RNA815_7315} {RNA1310_16058.1}
19. Cluster-7993.5535 RNA1509_1825 7.83 RNA1509_1825 {Length: 1168} {Type: 5UTR_CDS_3UTR} {RNA815_4444} {RNA1310_13306}
20. Cluster-7993.3286 RNA1509_542, RNA1509_2821 7.79 X1 NME2

RNA1509_542 {Length: 887} {TRANSSPLICED} {Type: 5UTR_CDS_3UTR} {Pfam: Nucleoside diphosphate kinase [PF00334.14, score=178.6]} {Human: NME2, non-metastatic cells 2, protein (NM23B) expressed in [Source:HGNC Symbol;Acc:7850], e=5e-75} {UniRef50_P22392, e=2e-76, Nucleoside diphosphate kinase B n=26 Tax=Eutheria RepID=NDKB_HUMAN [Mammals:Chordata]} {Drosophila: awd, abnormal wing discs [Source:FlyBase gene name;Acc:FBgn0000150], e=2e-72} {RNA815_20098} {RNA1310_42558} {Smed: dd_Smed_v6_856_0_1,dd_Smed_v6_1096_0_1}

RNA1509_2821 {Length: 893} {TRANSSPLICED} {Type: 5UTR_CDS_3UTR} {Pfam: Nucleoside diphosphate kinase [PF00334.14, score=178.6]} {Human: NME2, non-metastatic cells 2, protein (NM23B) expressed in [Source:HGNC Symbol;Acc:7850], e=6e-75} {UniRef50_P22392, e=2e-76, Nucleoside diphosphate kinase B n=26 Tax=Eutheria RepID=NDKB_HUMAN [Mammals:Chordata]} {Drosophila: awd, abnormal wing discs [Source:FlyBase gene name;Acc:FBgn0000150], e=2e-72} {RNA815_20098} {RNA1310_42558} {Smed: dd_Smed_v6_856_0_1,dd_Smed_v6_1096_0_1}
First Previous 1 2 3 Next Last
Berezikov Lab - 2016 © ERIBA