M. lignano Neoblast Screen 2016 Transcriptional signatures of somatic neoblasts and germline cells in Macrostomum lignano. (2016) Grudniewska M*, Mouton S*, Simanov S, Beltman F, Grelling M, de Mulder K, Arindrarto W, Weissert P, van der Elst S, Berezikov E. eLife 2016;5:e20607. Home Download

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Found 1860 results for log2(IntG2M/IntG1) between 0 and 1 and fdr <= 0.05. Showing entries 1-20.

Graph Cluster Transcripts Mean logCPM Classification Smed/Human type Human gene Annotation
1. Cluster-7993.2941 RNA1509_311 14.06

 Int S/G2/M 

 RNA1509_311 {Length: 533} {Type: 5UTR_CDS_3UTR} {RNA815_3057.3} {RNA1310_53106.1}
2. Cluster-7993.2922 RNA1509_2, RNA1509_10, RNA1509_131 13.91

 Int S/G2/M 

RNA1509_2 {Length: 903} {Type: 5UTR_CDS_3UTR} {tRNA: Gln(TTG),org, score=22.26} {RNA815_3057.1} {RNA1310_53106.1}

RNA1509_10 {Length: 907} {Type: 5UTR_CDS_3UTR} {tRNA: Gln(TTG),org, score=22.26} {RNA815_3057.1} {RNA1310_53106.1}

RNA1509_131 {Length: 839} {Type: 5UTR_CDS_3UTR} {tRNA: Lys(TTT),org, score=24.50} {RNA815_3057.1} {RNA1310_53106.1}
3. Cluster-7993.2925 RNA1509_892 13.91

 Int S/G2/M 

 RNA1509_892 {Length: 896} {Type: 5UTR_CDS_3UTR} {tRNA: Gln(TTG),org, score=22.26} {RNA815_3057.1} {RNA1310_53106.1}
4. Cluster-7993.2924 RNA1509_565 13.86

 Int S/G2/M 

 RNA1509_565 {Length: 849} {Type: 5UTR_CDS_3UTR} {RNA815_3057.3} {RNA1310_53106.1}
5. Cluster-7993.2930 RNA1509_4 13.77

 Int S/G2/M 

 MT-ND1 RNA1509_4 {Length: 1758} {Type: 5UTR_CDS_3UTR} {Pfam: NADH dehydrogenase [PF00146.16, score=189.9]} {Human: MT-ND1, mitochondrially encoded NADH dehydrogenase 1 [Source:HGNC Symbol;Acc:7455], e=3e-29} {UniRef50_S4T1K1, e=4e-15, NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=Arthropoda RepID=S4T1K1_9MYRI [Invertebrates:]} {Drosophila: mt:ND1, mitochondrial NADH-ubiquinone oxidoreductase chain 1 [Source:FlyBase gene name;Acc:FBgn0013679], e=8e-30} {RNA815_8311.1} {RNA1310_12992.1} {Smed: dd_Smed_v6_258_0_1}
6. Cluster-7993.2936 RNA1509_39 13.68

 Int S/G2/M 

 MT-ND1 RNA1509_39 {Length: 1666} {Type: 5UTR_CDS_3UTR} {Pfam: NADH dehydrogenase [PF00146.16, score=190.0]} {Human: MT-ND1, mitochondrially encoded NADH dehydrogenase 1 [Source:HGNC Symbol;Acc:7455], e=3e-29} {UniRef50_S4T1K1, e=4e-15, NADH-ubiquinone oxidoreductase chain 1 n=4 Tax=Arthropoda RepID=S4T1K1_9MYRI [Invertebrates:]} {Drosophila: mt:ND1, mitochondrial NADH-ubiquinone oxidoreductase chain 1 [Source:FlyBase gene name;Acc:FBgn0013679], e=7e-30} {RNA815_8311.1} {RNA1310_12992.1} {Smed: dd_Smed_v6_258_0_1}
7. Cluster-7993.2944 RNA1509_46227 12.87

 Int S/G2/M 

 MT-ND1 RNA1509_46227 {Length: 496} {Type: 5UTR_CDS_3UTR} {Pfam: NADH dehydrogenase [PF00146.16, score=57.4]} {Human: MT-ND1, mitochondrially encoded NADH dehydrogenase 1 [Source:HGNC Symbol;Acc:7455], e=7e-08} {Drosophila: mt:ND1, mitochondrial NADH-ubiquinone oxidoreductase chain 1 [Source:FlyBase gene name;Acc:FBgn0013679], e=7e-11} {RNA815_8311.1} {RNA1310_12992.1}
8. Cluster-7993.2931 RNA1509_7 11.68

 Int S/G2/M 

 MT-CO3 RNA1509_7 {Length: 2415} {Type: 5UTR_CDS_3UTR} {tRNA: Ala(TGC),org, score=19.57} {Pfam: Cytochrome c oxidase subunit III [PF00510.13, score=218.2]} {Human: MT-CO3, mitochondrially encoded cytochrome c oxidase III [Source:HGNC Symbol;Acc:7422], e=8e-56} {Drosophila: mt:CoIII, mitochondrial Cytochrome c oxidase subunit III [Source:FlyBase gene name;Acc:FBgn0013676], e=1e-57} {RNA815_5605.2} {RNA1310_28412.1}
9. Cluster-7993.2933 RNA1509_20 10.37

 Int S/G2/M 

 MT-ND1 RNA1509_20 {Length: 1760} {Type: 5UTR_CDS_3UTR} {Pfam: NADH dehydrogenase [PF00146.16, score=127.6]} {Human: MT-ND1, mitochondrially encoded NADH dehydrogenase 1 [Source:HGNC Symbol;Acc:7455], e=1e-19} {UniRef50_A0A0F6Q1A9, e=5e-21, ATP synthase F0 subunit 6 (Fragment) n=1 Tax=Stylochoplana maculata RepID=A0A0F6Q1A9_9PLAT [Invertebrates:Platyhelminthes]} {Drosophila: mt:ND1, mitochondrial NADH-ubiquinone oxidoreductase chain 1 [Source:FlyBase gene name;Acc:FBgn0013679], e=5e-18} {RNA815_8311.1} {RNA1310_12992.1} {Smed: dd_Smed_v6_258_0_1}
10. Cluster-7993.2938 RNA1509_969 10.07

 Int S/G2/M 

 MT-ND1 RNA1509_969 {Length: 1788} {Type: 5UTR_CDS_3UTR} {Pfam: NADH dehydrogenase [PF00146.16, score=190.0]} {Human: MT-ND1, mitochondrially encoded NADH dehydrogenase 1 [Source:HGNC Symbol;Acc:7455], e=4e-29} {UniRef50_A0A0F6Q1A9, e=5e-21, ATP synthase F0 subunit 6 (Fragment) n=1 Tax=Stylochoplana maculata RepID=A0A0F6Q1A9_9PLAT [Invertebrates:Platyhelminthes]} {Drosophila: mt:ND1, mitochondrial NADH-ubiquinone oxidoreductase chain 1 [Source:FlyBase gene name;Acc:FBgn0013679], e=9e-30} {RNA815_8311.1} {RNA1310_12992.1} {Smed: dd_Smed_v6_258_0_1}
11. Cluster-7993.2947 RNA1509_266 10.03

 Int S/G2/M 

 MT-ND4 RNA1509_266 {Length: 2945} {Type: 5UTR_CDS_3UTR} {Pfam: NADH-Ubiquinone/plastoquinone (complex I), various chains [PF00361.15, score=135.2]} {Human: MT-ND4, mitochondrially encoded NADH dehydrogenase 4 [Source:HGNC Symbol;Acc:7459], e=1e-28} {UniRef50_D1FMY6, e=4e-21, NADH-ubiquinone oxidoreductase chain 4 n=8 Tax=Arhynchobdellida RepID=D1FMY6_9ANNE [Invertebrates:Annelida]} {Drosophila: mt:ND4, mitochondrial NADH-ubiquinone oxidoreductase chain 4 [Source:FlyBase gene name;Acc:FBgn0262952], e=4e-32} {RNA815_21424} {RNA1310_529} {Smed: dd_Smed_v6_292_0_1}
12. Cluster-7993.2939 RNA1509_1538 10

 Int S/G2/M 

 MT-ND1 RNA1509_1538 {Length: 1395} {Type: 5UTR_CDS_3UTR} {Pfam: NADH dehydrogenase [PF00146.16, score=128.5]} {Human: MT-ND1, mitochondrially encoded NADH dehydrogenase 1 [Source:HGNC Symbol;Acc:7455], e=9e-20} {UniRef50_A0A0F6Q1A9, e=5e-21, ATP synthase F0 subunit 6 (Fragment) n=1 Tax=Stylochoplana maculata RepID=A0A0F6Q1A9_9PLAT [Invertebrates:Platyhelminthes]} {Drosophila: mt:ND1, mitochondrial NADH-ubiquinone oxidoreductase chain 1 [Source:FlyBase gene name;Acc:FBgn0013679], e=3e-18} {RNA815_8311.1} {RNA1310_12992.1} {Smed: dd_Smed_v6_258_0_1}
13. Cluster-7993.2953 RNA1509_2505 9.84

 Int S/G2/M 

 MT-ND5 RNA1509_2505 {Length: 2893} {Type: 5UTR_CDS_3UTR} {Pfam: NADH-Ubiquinone/plastoquinone (complex I), various chains [PF00361.15, score=142.1]} {Human: MT-ND5, mitochondrially encoded NADH dehydrogenase 5 [Source:HGNC Symbol;Acc:7461], e=3e-21} {UniRef50_A0A0E3DQR5, e=6e-29, NADH dehydrogenase subunit 5 n=1 Tax=Ibalia leucospoides RepID=A0A0E3DQR5_9HYME [Invertebrates:Arthropoda]} {Drosophila: mt:ND5, mitochondrial NADH-ubiquinone oxidoreductase chain 5 [Source:FlyBase gene name;Acc:FBgn0013684], e=2e-37} {RNA815_14141.1} {RNA1310_529} {Smed: dd_Smed_v6_957_0_1}
14. Cluster-7993.3278 RNA1509_17, RNA1509_51127 9.52

 Int S/G2/M 

 Asexual_biased; X1 HSPA8

RNA1509_17 {Length: 2362} {Type: 5UTR_CDS_3UTR} {Pfam: Hsp70 protein [PF00012.15, score=909.3]} {Human: HSPA8, heat shock 70kDa protein 8 [Source:HGNC Symbol;Acc:5241], e=0.0} {UniRef50_P63017, e=0.0, Heat shock cognate 71 kDa protein n=2167 Tax=Eukaryota RepID=HSP7C_MOUSE [Invertebrates:]} {Drosophila: Hsc70-4, Heat shock protein cognate 4 [Source:FlyBase gene name;Acc:FBgn0266599], e=0.0} {RNA815_1206.2} {RNA1310_4147.2} {Smed: dd_Smed_v6_15_0_1,dd_Smed_v6_320_0_2,dd_Smed_v6_320_0_1,dd_Smed_v6_2221_0_1}

RNA1509_51127 {Length: 478} {Type: 5UTR_CDS_3UTR} {Pfam: NAD-specific glutamate dehydrogenase [PF10712.4, score=177.6]}
15. Cluster-10576.0 RNA1509_102 9.14

 Int S/G2/M 

 X1 ATP5A1 RNA1509_102 {Length: 2372} {TRANSSPLICED} {Type: 5UTR_CDS_3UTR} {Pfam: ATP synthase alpha/beta family, nucleotide-binding domain [PF00006.20, score=242.3]} {Human: ATP5A1, ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle [Source:HGNC Symbol;Acc:823], e=0.0} {UniRef50_P25705, e=0.0, ATP synthase subunit alpha, mitochondrial n=168 Tax=cellular organisms RepID=ATPA_HUMAN [Unassigned:]} {Drosophila: blw, bellwether [Source:FlyBase gene name;Acc:FBgn0011211], e=0.0} {Celegans: H28O16.1, Caenorhabditis elegans Protein H28O16.1, isoform d. [Source:RefSeq mRNA;Acc:NM_001026358], e=0.0} {RNA815_2316} {RNA1310_10282.1} {Smed: dd_Smed_v6_731_0_1}
16. Cluster-12162.1 RNA1509_341, RNA1509_668, RNA1509_3580 8.93

 Int S/G2/M 

 Sexual_biased; X1 RPL19

RNA1509_341 {Length: 864} {Type: 5UTR_CDS_3UTR} {Pfam: Ribosomal protein L19e [PF01280.15, score=207.1]} {Human: RPL19, ribosomal protein L19 [Source:HGNC Symbol;Acc:10312], e=4e-71} {UniRef50_B7QKS6, e=2e-71, Ribosomal protein L19 n=10 Tax=Arthropoda RepID=B7QKS6_IXOSC [Invertebrates:]} {Drosophila: RpL19, Ribosomal protein L19 [Source:FlyBase gene name;Acc:FBgn0002607], e=1e-68} {RNA815_1809.1} {RNA1310_39193} {Smed: dd_Smed_v6_228_0_1}

RNA1509_668 {Length: 846} {Type: 5UTR_CDS_3UTR} {Pfam: Ribosomal protein L19e [PF01280.15, score=207.2]} {Human: RPL19, ribosomal protein L19 [Source:HGNC Symbol;Acc:10312], e=3e-71} {UniRef50_B7QKS6, e=2e-71, Ribosomal protein L19 n=10 Tax=Arthropoda RepID=B7QKS6_IXOSC [Invertebrates:]} {Drosophila: RpL19, Ribosomal protein L19 [Source:FlyBase gene name;Acc:FBgn0002607], e=1e-68} {RNA815_1809.1} {RNA1310_39193} {Smed: dd_Smed_v6_228_0_1}

RNA1509_3580 {Length: 1176} {Type: 5UTR_CDS_3UTR} {Pfam: Ribosomal protein L19e [PF01280.15, score=206.0]} {Human: RPL19, ribosomal protein L19 [Source:HGNC Symbol;Acc:10312], e=1e-69} {UniRef50_B7QKS6, e=2e-71, Ribosomal protein L19 n=10 Tax=Arthropoda RepID=B7QKS6_IXOSC [Invertebrates:]} {Drosophila: RpL19, Ribosomal protein L19 [Source:FlyBase gene name;Acc:FBgn0002607], e=3e-67} {RNA815_1809.1} {RNA1310_39193} {Smed: dd_Smed_v6_228_0_1}
17. Cluster-7993.2943 RNA1509_281 8.93

 Int S/G2/M 

 RNA1509_281 {Length: 452} {Type: 5UTR_CDS_3UTR} {RNA815_21767.2} {RNA1310_28412.1}
18. Cluster-16383.10 RNA1509_28, RNA1509_10935 8.83

 Int S/G2/M 

 X1 EEF2

RNA1509_28 {Length: 3206} {Type: 5UTR_CDS_3UTR} {Pfam: Elongation factor Tu GTP binding domain [PF00009.22, score=200.7]} {Human: EEF2, eukaryotic translation elongation factor 2 [Source:HGNC Symbol;Acc:3214], e=0.0} {UniRef50_U3JDP2, e=0.0, Uncharacterized protein n=174 Tax=Opisthokonta RepID=U3JDP2_FICAL [Plants:]} {Drosophila: EF2, Elongation factor 2 [Source:FlyBase gene name;Acc:FBgn0000559], e=0.0} {RNA815_1555.1} {RNA1310_2711} {Smed: dd_Smed_v6_186_0_1}

RNA1509_10935 {Length: 3168} {Type: 5UTR_CDS_3UTR} {Pfam: Elongation factor Tu GTP binding domain [PF00009.22, score=200.7]} {Human: EEF2, eukaryotic translation elongation factor 2 [Source:HGNC Symbol;Acc:3214], e=0.0} {UniRef50_U3JDP2, e=0.0, Uncharacterized protein n=174 Tax=Opisthokonta RepID=U3JDP2_FICAL [Plants:]} {Drosophila: EF2, Elongation factor 2 [Source:FlyBase gene name;Acc:FBgn0000559], e=0.0} {RNA815_1555.1} {RNA1310_2711} {Smed: dd_Smed_v6_186_0_1}
19. Cluster-7993.2307 RNA1509_165, RNA1509_6902 8.81

 Int S/G2/M 

 X1 RPS24

RNA1509_165 {Length: 634} {TRANSSPLICED} {Type: 5UTR_CDS_3UTR} {Pfam: Ribosomal protein S24e [PF01282.14, score=67.0]} {Human: RPS24, ribosomal protein S24 [Source:HGNC Symbol;Acc:10411], e=6e-22} {Drosophila: RpS24, Ribosomal protein S24 [Source:FlyBase gene name;Acc:FBgn0261596], e=5e-22} {RNA815_14000} {RNA1310_38958.2} {Smed: dd_Smed_v6_164_0_1}

RNA1509_6902 {Length: 978} {TRANSSPLICED} {Type: 5UTR_CDS_3UTR} {Pfam: Ribosomal protein S24e [PF01282.14, score=65.9]} {Human: RPS24, ribosomal protein S24 [Source:HGNC Symbol;Acc:10411], e=6e-21} {Drosophila: RpS24, Ribosomal protein S24 [Source:FlyBase gene name;Acc:FBgn0261596], e=4e-21} {RNA815_14000} {RNA1310_38958.1} {Smed: dd_Smed_v6_164_0_1}
20. Cluster-7993.2300 RNA1509_116 8.78

 Int S/G2/M 

 X1 RPS4X RNA1509_116 {Length: 1063} {TRANSSPLICED} {Type: 5UTR_CDS_3UTR} {Pfam: Ribosomal family S4e [PF00900.15, score=105.0]} {Human: RPS4X, ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424], e=1e-139} {UniRef50_P62701, e=1e-140, 40S ribosomal protein S4, X isoform n=188 Tax=Eukaryota RepID=RS4X_HUMAN [Invertebrates:]} {Drosophila: RpS4, Ribosomal protein S4 [Source:FlyBase gene name;Acc:FBgn0011284], e=1e-127} {Celegans: rps-4, Caenorhabditis elegans Protein RPS-4 (rps-4) mRNA, complete cds. [Source:RefSeq mRNA;Acc:NM_068702], e=1e-115} {RNA815_15889.2} {RNA1310_35395} {Smed: dd_Smed_v6_82_0_1}
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