M. lignano Neoblast Screen 2016 Transcriptional signatures of somatic neoblasts and germline cells in Macrostomum lignano. (2016) Grudniewska M*, Mouton S*, Simanov S, Beltman F, Grelling M, de Mulder K, Arindrarto W, Weissert P, van der Elst S, Berezikov E. eLife 2016;5:e20607. Home Download

Text search

search Exact search

Found 1098 results for log2(Irr24h/Irr0h) >= 1 and fdr <= 0.05. Showing entries 1-20.

Graph Cluster Transcripts Mean logCPM Classification Smed/Human type Human gene Annotation
1. Cluster-12747.1 RNA1509_3 13.24 Xins RNA1509_3 {Length: 6959} {TRANSSPLICED} {Type: 5UTR_CDS_3UTR} {rRNA: 18s_rRNA,euk, score=1511.2} {RNA815_80.1} {RNA1310_851.1} {Smed: dd_Smed_v6_7_0_1}
2. Cluster-12747.0 RNA1509_1 12.88 RNA1509_1 {Length: 5535} {Type: 5UTR_CDS_3UTR} {rRNA: 28s_rRNA,euk, score=3185.1} {RNA815_80.1} {RNA1310_851.1} {Smed: dd_Smed_v6_4_1_1}
3. Cluster-12747.15 RNA1509_117 10.95 RNA1509_117 {Length: 236} {Type: 5UTR_CDS_3UTR} {RNA815_6853} {RNA1310_851.1}
4. Cluster-12747.23 RNA1509_67, RNA1509_1780, RNA1509_14576, RNA1509_43189 10.88

RNA1509_67 {Length: 2696} {Type: 5UTR_CDS_3UTR} {rRNA: 28s_rRNA,euk, score=1170.4} {RNA815_80.1} {RNA1310_8217} {Smed: dd_Smed_v6_4_1_1}

RNA1509_1780 {Length: 2907} {Type: 5UTR_CDS_3UTR} {rRNA: 28s_rRNA,euk, score=993.4} {RNA815_80.1} {RNA1310_8217} {Smed: dd_Smed_v6_4_1_1}

RNA1509_14576 {Length: 761} {Type: 5UTR_CDS} {RNA1310_41890} {Smed: dd_Smed_v6_36143_0_1}

RNA1509_43189 {Length: 105} {Type: 5UTR_CDS_3UTR} {UniRef50_X1XFY6, e=2e-10, Uncharacterized protein n=1 Tax=Acyrthosiphon pisum RepID=X1XFY6_ACYPI [Invertebrates:Arthropoda]} {RNA815_80.2} {RNA1310_77898}
5. Cluster-12747.16 RNA1509_1332 10.88 RNA1509_1332 {Length: 183} {Type: 5UTR_CDS_3UTR} {RNA815_6853} {RNA1310_851.1}
6. Cluster-12747.8 RNA1509_83 10.31 RNA1509_83 {Length: 1637} {Type: 5UTR_CDS_NC_3UTR} {rRNA: 28s_rRNA,euk, score=288.9} {UniRef50_C6JSJ8, e=1e-08, Putative uncharacterized protein Sb1138s002030 n=7 Tax=cellular organisms RepID=C6JSJ8_SORBI [Unassigned:]} {RNA815_80.1} {RNA1310_8217} {Smed: dd_Smed_v6_4_1_1}
7. Cluster-7993.3059 RNA1509_313, RNA1509_340, RNA1509_40634 8.78 X2 SLURP1

RNA1509_313 {Length: 779} {Type: 5UTR_CDS_3UTR} {Human: SLURP1, secreted LY6/PLAUR domain containing 1 [Source:HGNC Symbol;Acc:18746], e=0.006} {UniRef50_G4LUC3, e=2e-05, Putative uncharacterized protein n=3 Tax=Schistosoma RepID=G4LUC3_SCHMA [Invertebrates:Platyhelminthes]} {RNA815_20483.1} {RNA1310_14249} {Smed: dd_Smed_v6_5456_0_1,dd_Smed_v6_19831_0_1}

RNA1509_340 {Length: 937} {Type: 5UTR_CDS_3UTR} {Human: SLURP1, secreted LY6/PLAUR domain containing 1 [Source:HGNC Symbol;Acc:18746], e=0.007} {UniRef50_G4LUC3, e=2e-05, Putative uncharacterized protein n=3 Tax=Schistosoma RepID=G4LUC3_SCHMA [Invertebrates:Platyhelminthes]} {RNA815_20483.1} {RNA1310_14249} {Smed: dd_Smed_v6_5456_0_1,dd_Smed_v6_19831_0_1}

RNA1509_40634 {Length: 904} {Type: 5UTR_CDS_3UTR} {Human: SLURP1, secreted LY6/PLAUR domain containing 1 [Source:HGNC Symbol;Acc:18746], e=0.001} {UniRef50_G4LUC3, e=2e-05, Putative uncharacterized protein n=3 Tax=Schistosoma RepID=G4LUC3_SCHMA [Invertebrates:Platyhelminthes]} {RNA815_20483.1} {RNA1310_14249} {Smed: dd_Smed_v6_5456_0_1,dd_Smed_v6_19831_0_1}
8. Cluster-12747.25 RNA1509_10107 8.63 RNA1509_10107 {Length: 182} {Type: 5UTR_CDS_3UTR} {RNA815_80.1} {RNA1310_8217}
9. Cluster-7993.3034 RNA1509_24892, RNA1509_42125 8.52

RNA1509_24892 {Length: 1156} {Type: 5UTR_CDS_3UTR} {RNA815_23391} {RNA1310_63405}

RNA1509_42125 {Length: 1017} {Type: 5UTR_CDS_3UTR} {RNA815_23391} {RNA1310_63405}
10. Cluster-7993.3025 RNA1509_50 8.5 RNA1509_50 {Length: 573} {Type: 5UTR_CDS_3UTR} {RNA815_23391} {RNA1310_63405}
11. Cluster-7993.3026 RNA1509_57 8.38 RNA1509_57 {Length: 505} {Type: 5UTR_CDS_3UTR} {RNA815_23391} {RNA1310_63405}
12. Cluster-7993.1530 RNA1509_246, RNA1509_713 8.36

RNA1509_246 {Length: 1254} {Type: 5UTR_CDS_3UTR} {RNA815_17246} {RNA1310_44546}

RNA1509_713 {Length: 1063} {Type: 5UTR_CDS_3UTR} {RNA815_17246} {RNA1310_44546}
13. Cluster-7993.3032 RNA1509_33982 8.27 RNA1509_33982 {Length: 837} {Type: 5UTR_CDS_3UTR} {RNA815_23391} {RNA1310_63405}
14. Cluster-7993.1528 RNA1509_232 8.26 RNA1509_232 {Length: 522} {Type: 5UTR_CDS_3UTR} {RNA815_1838.1} {RNA1310_75727}
15. Cluster-7993.3030 RNA1509_19639 8.22 RNA1509_19639 {Length: 500} {Type: 5UTR_CDS_3UTR} {RNA815_2254.1} {RNA1310_63405}
16. Cluster-7993.3029 RNA1509_12716 8.19 RNA1509_12716 {Length: 1100} {Type: 5UTR_CDS_3UTR} {RNA815_23391} {RNA1310_63405}
17. Cluster-14650.2 RNA1509_255, RNA1509_1422 8.16 AHCY

RNA1509_255 {Length: 2309} {Type: 5UTR_CDS_3UTR} {Pfam: S-adenosyl-L-homocysteine hydrolase [PF05221.12, score=470.0]} {Human: AHCY, adenosylhomocysteinase [Source:HGNC Symbol;Acc:343], e=0.0} {UniRef50_P10819, e=0.0, Adenosylhomocysteinase n=1010 Tax=root RepID=SAHH_DICDI [Unassigned:]} {Drosophila: Ahcy13, Adenosylhomocysteinase at 13 [Source:FlyBase gene name;Acc:FBgn0014455], e=0.0} {RNA815_4519.2} {RNA1310_14602} {Smed: dd_Smed_v6_526_0_1}

RNA1509_1422 {Length: 2382} {Type: 5UTR_CDS_3UTR} {Pfam: S-adenosyl-L-homocysteine hydrolase [PF05221.12, score=469.9]} {Human: AHCY, adenosylhomocysteinase [Source:HGNC Symbol;Acc:343], e=0.0} {UniRef50_P10819, e=0.0, Adenosylhomocysteinase n=1010 Tax=root RepID=SAHH_DICDI [Unassigned:]} {Drosophila: Ahcy13, Adenosylhomocysteinase at 13 [Source:FlyBase gene name;Acc:FBgn0014455], e=0.0} {Celegans: ahcy-1, Caenorhabditis elegans Protein AHCY-1 (ahcy-1) mRNA, complete cds. [Source:RefSeq mRNA;Acc:NM_059554], e=0.0} {RNA815_4519.1} {RNA1310_14138.1} {Smed: dd_Smed_v6_526_0_1}
18. Cluster-7993.3033 RNA1509_39274 8.13 RNA1509_39274 {Length: 560} {Type: 5UTR_CDS_3UTR} {RNA815_23391} {RNA1310_63405}
19. Cluster-12747.3 RNA1509_12443 8.08 RNA1509_12443 {Length: 3265} {TRANSSPLICED} {Type: 5UTR_CDS_3UTR} {rRNA: 18s_rRNA,euk, score=205.5} {RNA815_80.1} {RNA1310_14828.1}
20. Cluster-7993.3052 RNA1509_26984 8.07 RNA1509_26984 {Length: 491} {Type: 5UTR_CDS_3UTR} {RNA815_23391} {RNA1310_63405}
First Previous 1 2 3 Next Last
Berezikov Lab - 2016 © ERIBA