Graph | Cluster | Transcripts | Mean logCPM | Classification | Smed/Human type | Human gene | Annotation |
---|---|---|---|---|---|---|---|
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Cluster-12747.8 | RNA1509_83 | 10.31 | RNA1509_83 {Length: 1637} {Type: 5UTR_CDS_NC_3UTR} {rRNA: 28s_rRNA,euk, score=288.9} {UniRef50_C6JSJ8, e=1e-08, Putative uncharacterized protein Sb1138s002030 n=7 Tax=cellular organisms RepID=C6JSJ8_SORBI [Unassigned:]} {RNA815_80.1} {RNA1310_8217} {Smed: dd_Smed_v6_4_1_1} | |||
|
Cluster-7993.2928 | RNA1509_43660 | 8.47 | RNA1509_43660 {Length: 293} {Type: 5UTR_CDS_3UTR} {RNA815_3057.1} {RNA1310_53955.1} | |||
|
Cluster-7993.2942 | RNA1509_48581 | 8.21 | RNA1509_48581 {Length: 154} {Type: 5UTR_CDS_3UTR} {RNA815_3057.4} {RNA1310_58760.6} | |||
|
Cluster-12747.3 | RNA1509_12443 | 8.08 | RNA1509_12443 {Length: 3265} {TRANSSPLICED} {Type: 5UTR_CDS_3UTR} {rRNA: 18s_rRNA,euk, score=205.5} {RNA815_80.1} {RNA1310_14828.1} | |||
|
Cluster-12747.2 | RNA1509_1482 | 7.73 | RNA1509_1482 {Length: 1896} {Type: 5UTR_CDS_3UTR} {rRNA: 18s_rRNA,euk, score=232.5} {UniRef50_A0A068XZB1, e=1e-07, CHK1 checkpoint protein n=1 Tax=Echinococcus multilocularis RepID=A0A068XZB1_ECHMU [Invertebrates:Platyhelminthes]} {RNA815_80.1} {RNA1310_15760} | |||
|
Cluster-7993.2963 | RNA1509_5101 | 7.56 | RNA1509_5101 {Length: 695} {Type: 5UTR_CDS_3UTR} {RNA815_14141.1} {RNA1310_529} | |||
|
Cluster-12442.4 | RNA1509_10933 | 7.18 | RNA1509_10933 {Length: 442} {Type: 5UTR_CDS_3UTR} {RNA815_7257.1} {RNA1310_28923} | |||
|
Cluster-7993.2961 | RNA1509_309 | 7.04 | RNA1509_309 {Length: 168} {Type: 5UTR_CDS_3UTR} {RNA815_3057.1} {RNA1310_53955.1} | |||
|
Cluster-9701.1 | RNA1509_12334 | 6.46 | Irradiation Int S/G2/M Germline |
RNA1509_12334 {Length: 205} {Type: CDS_3UTR} {RNA815_5866.1} {RNA1310_31679} | ||
|
Cluster-14402.0 | RNA1509_501 | 6.24 | Irradiation Int S/G2/M Germline |
RNA1509_501 {Length: 2730} {Type: 5UTR_CDS_3UTR} {UniRef50_C4NFL4, e=1e-05, Nucleocapsid n=3 Tax=Nyamiviridae RepID=C4NFL4_9MONO [Viruses:]} {RNA815_23351} {RNA1310_212} | ||
|
Cluster-12747.24 | RNA1509_63 | 5.78 | RNA1509_63 {Length: 185} {Type: 5UTR_CDS_3UTR} {RNA815_80.1} {RNA1310_15760} | |||
|
Cluster-9825.2 | RNA1509_12760, RNA1509_20734, RNA1509_38280 | 5.72 | CALML5 | RNA1509_12760 {Length: 2003} {Type: 5UTR_CDS_3UTR} {Pfam: EF hand [PF00036.27, score=39.1]} {RNA815_12385} {RNA1310_13493.1} RNA1509_20734 {Length: 3259} {Type: 5UTR_CDS_3UTR} {Pfam: EF hand [PF00036.27, score=37.8]} {RNA815_12385} {RNA1310_13493.1} RNA1509_38280 {Length: 1602} {Type: 5UTR_CDS_3UTR} {Pfam: EF hand [PF00036.27, score=39.8]} {Human: CALML5, calmodulin-like 5 [Source:HGNC Symbol;Acc:18180], e=0.008} {RNA815_12385} {RNA1310_13493.1} |
||
|
Cluster-7993.373 | RNA1509_3080, RNA1509_57043 | 5.66 | RNA1509_3080 {Length: 572} {Type: 5UTR_CDS_3UTR} {RNA815_12351} {RNA1310_16734} RNA1509_57043 {Length: 576} {Type: 5UTR_CDS_3UTR} {RNA815_12351} {RNA1310_55266.1} |
|||
|
Cluster-12747.4 | RNA1509_60 | 5.5 | RNA1509_60 {Length: 450} {Type: 5UTR_CDS_3UTR} {RNA815_80.1} {RNA1310_851.1} | |||
|
Cluster-14402.2 | RNA1509_7788 | 5.28 | Irradiation Int S/G2/M Germline |
RNA1509_7788 {Length: 6427} {Type: 5UTR_CDS_3UTR} {Pfam: Mononegavirales RNA dependent RNA polymerase [PF00946.14, score=396.3]} {UniRef50_C4NFK9, e=0.0, Large structural protein n=3 Tax=Nyamiviridae RepID=C4NFK9_9MONO [Viruses:]} {RNA1310_212} | ||
|
Cluster-7993.6474 | RNA1509_209 | 5.12 | RNA1509_209 {Length: 520} {Type: 5UTR_CDS_3UTR} {RNA815_4202.1} {RNA1310_17208} | |||
|
Cluster-7993.8981 | RNA1509_641, RNA1509_1691 | 5.02 | Irradiation Int S/G2/M Germline |
RP11-631M21.2 | RNA1509_641 {Length: 1546} {Type: 5UTR_CDS_3UTR} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.20, score=132.0]} {Human: RP11-631M21.2, Tubulin beta-8 chain [Source:UniProtKB/Swiss-Prot;Acc:Q3ZCM7], e=4e-79} {UniRef50_B0W043, e=1e-79, Tubulin beta-4 chain n=3 Tax=Bilateria RepID=B0W043_CULQU [Invertebrates:]} {Drosophila: betaTub56D, beta-Tubulin at 56D [Source:FlyBase gene name;Acc:FBgn0003887], e=1e-75} {RNA815_9069} {RNA1310_21655} RNA1509_1691 {Length: 1173} {Type: 5UTR_CDS_3UTR} {Pfam: Tubulin C-terminal domain [PF03953.12, score=64.4]} {Human: RP11-631M21.2, Tubulin beta-8 chain [Source:UniProtKB/Swiss-Prot;Acc:Q3ZCM7], e=3e-53} {UniRef50_A0A075B736, e=8e-52, Tubulin beta-8 chain n=33 Tax=Eukaryota RepID=A0A075B736_HUMAN [Invertebrates:]} {Drosophila: betaTub85D, beta-Tubulin at 85D [Source:FlyBase gene name;Acc:FBgn0003889], e=2e-48} {RNA815_9069} {RNA1310_21655} |
|
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Cluster-3633.1 | RNA1509_37964 | 5 | Int S/G2/M |
RNA1509_37964 {Length: 474} {Type: 5UTR_CDS_3UTR} {RNA815_42824} {RNA1310_85429} | ||
|
Cluster-11542.1 | RNA1509_1096, RNA1509_1313 | 4.93 | Irradiation |
RNA1509_1096 {Length: 1155} {Type: 5UTR_CDS_3UTR} {RNA815_10374.1} {RNA1310_28281.1} RNA1509_1313 {Length: 1585} {Type: 5UTR_CDS_3UTR} {RNA815_10374.1} {RNA1310_28281.1} |
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Cluster-7993.385 | RNA1509_2062 | 4.86 | RNA1509_2062 {Length: 330} {Type: 5UTR_CDS_3UTR} {RNA815_10864.2} {RNA1310_38798} |