M. lignano Neoblast Screen 2016 Transcriptional signatures of somatic neoblasts and germline cells in Macrostomum lignano. (2016) Grudniewska M*, Mouton S*, Simanov S, Beltman F, Grelling M, de Mulder K, Arindrarto W, Weissert P, van der Elst S, Berezikov E. eLife 2016;5:e20607. Home Download

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Found 1556 results for log2(Irr24h/Irr12h) between 0 and 1 and fdr <= 0.05. Showing entries 1-20.

Graph Cluster Transcripts Mean logCPM Classification Smed/Human type Human gene Annotation
1. Cluster-12747.0 RNA1509_1 12.88 RNA1509_1 {Length: 5535} {Type: 5UTR_CDS_3UTR} {rRNA: 28s_rRNA,euk, score=3185.1} {RNA815_80.1} {RNA1310_851.1} {Smed: dd_Smed_v6_4_1_1}
2. Cluster-12747.15 RNA1509_117 10.95 RNA1509_117 {Length: 236} {Type: 5UTR_CDS_3UTR} {RNA815_6853} {RNA1310_851.1}
3. Cluster-12747.23 RNA1509_67, RNA1509_1780, RNA1509_14576, RNA1509_43189 10.88

RNA1509_67 {Length: 2696} {Type: 5UTR_CDS_3UTR} {rRNA: 28s_rRNA,euk, score=1170.4} {RNA815_80.1} {RNA1310_8217} {Smed: dd_Smed_v6_4_1_1}

RNA1509_1780 {Length: 2907} {Type: 5UTR_CDS_3UTR} {rRNA: 28s_rRNA,euk, score=993.4} {RNA815_80.1} {RNA1310_8217} {Smed: dd_Smed_v6_4_1_1}

RNA1509_14576 {Length: 761} {Type: 5UTR_CDS} {RNA1310_41890} {Smed: dd_Smed_v6_36143_0_1}

RNA1509_43189 {Length: 105} {Type: 5UTR_CDS_3UTR} {UniRef50_X1XFY6, e=2e-10, Uncharacterized protein n=1 Tax=Acyrthosiphon pisum RepID=X1XFY6_ACYPI [Invertebrates:Arthropoda]} {RNA815_80.2} {RNA1310_77898}
4. Cluster-12747.16 RNA1509_1332 10.88 RNA1509_1332 {Length: 183} {Type: 5UTR_CDS_3UTR} {RNA815_6853} {RNA1310_851.1}
5. Cluster-7993.9330 RNA1509_835 10.38 TUBA1A RNA1509_835 {Length: 1602} {Type: 5UTR_CDS_3UTR} {Pfam: Tubulin C-terminal domain [PF03953.12, score=168.3]} {Human: TUBA1A, tubulin, alpha 1a [Source:HGNC Symbol;Acc:20766], e=0.0} {UniRef50_P02552, e=1e-170, Tubulin alpha-1 chain (Fragment) n=191 Tax=Eukaryota RepID=TBA1_CHICK [Invertebrates:]} {Drosophila: alphaTub84B, alpha-Tubulin at 84B [Source:FlyBase gene name;Acc:FBgn0003884], e=1e-180} {RNA815_343.1} {RNA1310_32709}
6. Cluster-12747.8 RNA1509_83 10.31 RNA1509_83 {Length: 1637} {Type: 5UTR_CDS_NC_3UTR} {rRNA: 28s_rRNA,euk, score=288.9} {UniRef50_C6JSJ8, e=1e-08, Putative uncharacterized protein Sb1138s002030 n=7 Tax=cellular organisms RepID=C6JSJ8_SORBI [Unassigned:]} {RNA815_80.1} {RNA1310_8217} {Smed: dd_Smed_v6_4_1_1}
7. Cluster-7993.3059 RNA1509_313, RNA1509_340, RNA1509_40634 8.78 X2 SLURP1

RNA1509_313 {Length: 779} {Type: 5UTR_CDS_3UTR} {Human: SLURP1, secreted LY6/PLAUR domain containing 1 [Source:HGNC Symbol;Acc:18746], e=0.006} {UniRef50_G4LUC3, e=2e-05, Putative uncharacterized protein n=3 Tax=Schistosoma RepID=G4LUC3_SCHMA [Invertebrates:Platyhelminthes]} {RNA815_20483.1} {RNA1310_14249} {Smed: dd_Smed_v6_5456_0_1,dd_Smed_v6_19831_0_1}

RNA1509_340 {Length: 937} {Type: 5UTR_CDS_3UTR} {Human: SLURP1, secreted LY6/PLAUR domain containing 1 [Source:HGNC Symbol;Acc:18746], e=0.007} {UniRef50_G4LUC3, e=2e-05, Putative uncharacterized protein n=3 Tax=Schistosoma RepID=G4LUC3_SCHMA [Invertebrates:Platyhelminthes]} {RNA815_20483.1} {RNA1310_14249} {Smed: dd_Smed_v6_5456_0_1,dd_Smed_v6_19831_0_1}

RNA1509_40634 {Length: 904} {Type: 5UTR_CDS_3UTR} {Human: SLURP1, secreted LY6/PLAUR domain containing 1 [Source:HGNC Symbol;Acc:18746], e=0.001} {UniRef50_G4LUC3, e=2e-05, Putative uncharacterized protein n=3 Tax=Schistosoma RepID=G4LUC3_SCHMA [Invertebrates:Platyhelminthes]} {RNA815_20483.1} {RNA1310_14249} {Smed: dd_Smed_v6_5456_0_1,dd_Smed_v6_19831_0_1}
8. Cluster-12747.25 RNA1509_10107 8.63 RNA1509_10107 {Length: 182} {Type: 5UTR_CDS_3UTR} {RNA815_80.1} {RNA1310_8217}
9. Cluster-7993.3034 RNA1509_24892, RNA1509_42125 8.52

RNA1509_24892 {Length: 1156} {Type: 5UTR_CDS_3UTR} {RNA815_23391} {RNA1310_63405}

RNA1509_42125 {Length: 1017} {Type: 5UTR_CDS_3UTR} {RNA815_23391} {RNA1310_63405}
10. Cluster-7993.3026 RNA1509_57 8.38 RNA1509_57 {Length: 505} {Type: 5UTR_CDS_3UTR} {RNA815_23391} {RNA1310_63405}
11. Cluster-7993.1530 RNA1509_246, RNA1509_713 8.36

RNA1509_246 {Length: 1254} {Type: 5UTR_CDS_3UTR} {RNA815_17246} {RNA1310_44546}

RNA1509_713 {Length: 1063} {Type: 5UTR_CDS_3UTR} {RNA815_17246} {RNA1310_44546}
12. Cluster-7993.3032 RNA1509_33982 8.27 RNA1509_33982 {Length: 837} {Type: 5UTR_CDS_3UTR} {RNA815_23391} {RNA1310_63405}
13. Cluster-7993.1528 RNA1509_232 8.26 RNA1509_232 {Length: 522} {Type: 5UTR_CDS_3UTR} {RNA815_1838.1} {RNA1310_75727}
14. Cluster-14650.2 RNA1509_255, RNA1509_1422 8.16 AHCY

RNA1509_255 {Length: 2309} {Type: 5UTR_CDS_3UTR} {Pfam: S-adenosyl-L-homocysteine hydrolase [PF05221.12, score=470.0]} {Human: AHCY, adenosylhomocysteinase [Source:HGNC Symbol;Acc:343], e=0.0} {UniRef50_P10819, e=0.0, Adenosylhomocysteinase n=1010 Tax=root RepID=SAHH_DICDI [Unassigned:]} {Drosophila: Ahcy13, Adenosylhomocysteinase at 13 [Source:FlyBase gene name;Acc:FBgn0014455], e=0.0} {RNA815_4519.2} {RNA1310_14602} {Smed: dd_Smed_v6_526_0_1}

RNA1509_1422 {Length: 2382} {Type: 5UTR_CDS_3UTR} {Pfam: S-adenosyl-L-homocysteine hydrolase [PF05221.12, score=469.9]} {Human: AHCY, adenosylhomocysteinase [Source:HGNC Symbol;Acc:343], e=0.0} {UniRef50_P10819, e=0.0, Adenosylhomocysteinase n=1010 Tax=root RepID=SAHH_DICDI [Unassigned:]} {Drosophila: Ahcy13, Adenosylhomocysteinase at 13 [Source:FlyBase gene name;Acc:FBgn0014455], e=0.0} {Celegans: ahcy-1, Caenorhabditis elegans Protein AHCY-1 (ahcy-1) mRNA, complete cds. [Source:RefSeq mRNA;Acc:NM_059554], e=0.0} {RNA815_4519.1} {RNA1310_14138.1} {Smed: dd_Smed_v6_526_0_1}
15. Cluster-7993.3052 RNA1509_26984 8.07 RNA1509_26984 {Length: 491} {Type: 5UTR_CDS_3UTR} {RNA815_23391} {RNA1310_63405}
16. Cluster-7993.7440 RNA1509_127 7.64 MOXD1 RNA1509_127 {Length: 2368} {Type: 5UTR_CDS_3UTR} {Pfam: Copper type II ascorbate-dependent monooxygenase, N-terminal domain [PF01082.15, score=79.8]} {Human: MOXD1, monooxygenase, DBH-like 1 [Source:HGNC Symbol;Acc:21063], e=3e-28} {UniRef50_V4AD73, e=1e-118, Uncharacterized protein n=3 Tax=Lottia gigantea RepID=V4AD73_LOTGI [Invertebrates:Mollusca]} {Drosophila: Tbh, Tyramine beta hydroxylase [Source:FlyBase gene name;Acc:FBgn0010329], e=3e-31} {Celegans: tbh-1, Caenorhabditis elegans Protein TBH-1, isoform b. [Source:RefSeq mRNA;Acc:NM_001270335], e=4e-35} {RNA815_4383.2} {RNA1310_10830.1}
17. Cluster-7993.1936 RNA1509_16256 7.62 ACTB RNA1509_16256 {Length: 1165} {Type: 5UTR_CDS_3UTR} {Pfam: Actin [PF00022.14, score=460.3]} {Human: ACTB, actin, beta [Source:HGNC Symbol;Acc:132], e=0.0} {UniRef50_P60709, e=0.0, Actin, cytoplasmic 1 n=3767 Tax=cellular organisms RepID=ACTB_HUMAN [Unassigned:]} {Drosophila: Act5C, Actin 5C [Source:FlyBase gene name;Acc:FBgn0000042], e=0.0} {RNA815_4929.3} {RNA1310_26699.1}
18. Cluster-7993.3730 RNA1509_179 7.58 ACTB RNA1509_179 {Length: 504} {Type: 5UTR_CDS_3UTR} {Pfam: Actin [PF00022.14, score=166.9]} {Human: ACTB, actin, beta [Source:HGNC Symbol;Acc:132], e=3e-68} {UniRef50_Q29173, e=8e-09, Cytoplasmic beta-actin (Fragment) n=1 Tax=Sus scrofa RepID=Q29173_PIG [Mammals:Chordata]} {Drosophila: Act42A, Actin 42A [Source:FlyBase gene name;Acc:FBgn0000043], e=3e-68} {RNA815_4929.3} {RNA1310_26699.1}
19. Cluster-4367.0 RNA1509_334 7.44 CPA2 RNA1509_334 {Length: 1505} {Type: 5UTR_CDS_3UTR} {Pfam: Zinc carboxypeptidase [PF00246.19, score=249.4]} {Human: CPA2, carboxypeptidase A2 (pancreatic) [Source:HGNC Symbol;Acc:2297], e=9e-62} {UniRef50_B4N1A2, e=7e-78, GK24194 n=7 Tax=Acalyptratae RepID=B4N1A2_DROWI [Invertebrates:Arthropoda]} {Drosophila: CG17633, , e=8e-69} {RNA815_8491} {RNA1310_22015}
20. Cluster-7993.2438 RNA1509_257 7.4 Epidermis II; Xins CAV3 RNA1509_257 {Length: 731} {Type: 5UTR_CDS_3UTR} {Pfam: Caveolin [PF01146.12, score=140.1]} {Human: CAV3, caveolin 3 [Source:HGNC Symbol;Acc:1529], e=1e-24} {UniRef50_K1Q3P2, e=3e-37, Vitamin D(3) 25-hydroxylase n=2 Tax=Crassostrea gigas RepID=K1Q3P2_CRAGI [Invertebrates:Mollusca]} {Drosophila: Pif2, PFTAIRE-interacting factor 2 [Source:FlyBase gene name;Acc:FBgn0046873], e=0.007} {RNA815_18477} {RNA1310_50452} {Smed: dd_Smed_v6_877_0_1} {WURTZEL: Epidermis II [dd_Smed_v6_877_0_1, caveolin 1, caveolae protein, 22kDa (CAV1)]}
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